ยง2024-12-14
- The most basic way to create a new environment is with the following command:
conda create -n <env-name>
- To add packages while creating an environment, specify them after the environment name:
conda create -n myenvironment python numpy pandas
For example:
alexlai@ApiServer:~$ ~/anaconda3/bin/conda create -n PY-3.10.15-R-4.4.2 python=3.10.15 r=4.4.2
Channels:
- defaults
Platform: linux-64
Collecting package metadata (repodata.json): done
Solving environment: failed
PackagesNotFoundError: The following packages are not available from current channels:
- r=4.4.2*
Current channels:
- https://repo.anaconda.com/pkgs/main
- https://repo.anaconda.com/pkgs/r
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
- Check Available R Versions on conda-forge You can try specifying the conda-forge channel, which often has a wider range of versions for both Python and R packages.
To create the environment with R from conda-forge, try this command:
alexlai@ApiServer:~$ ~/anaconda3/bin/conda create -n PY-3.10.15-R-4.4.2 python=3.10.15 r=4.4.2 -c conda-forge
Channels:
- conda-forge
- defaults
Platform: linux-64
Collecting package metadata (repodata.json): done
Solving environment: failed
PackagesNotFoundError: The following packages are not available from current channels:
- r=4.4.2*
Current channels:
- https://conda.anaconda.org/conda-forge
- https://repo.anaconda.com/pkgs/main
- https://repo.anaconda.com/pkgs/r
To search for alternate channels that may provide the conda package you're
looking for, navigate to
https://anaconda.org
and use the search bar at the top of the page.
alexlai@ApiServer:~$ ~/anaconda3/bin/conda search -c conda-forge r
Loading channels: done
# Name Version Build Channel
r 3.3.1 r3.3.1_0 pkgs/r
r 3.3.1 r3.3.1_1 pkgs/r
r 3.3.2 r3.3.2_0 conda-forge
r 3.3.2 r3.3.2_0 pkgs/r
r 3.4.1 r3.4.1_0 conda-forge
r 3.4.1 r3.4.1_0 pkgs/r
r 3.4.2 h65d9972_0 pkgs/r
r 3.4.3 mro343_0 pkgs/r
r 3.4.3 r343_0 pkgs/r
r 3.5.0 mro350_0 pkgs/r
r 3.5.0 r350_0 pkgs/r
r 3.5.1 mro351_0 pkgs/r
r 3.5.1 r351_0 conda-forge
r 3.5.1 r351_0 pkgs/r
r 3.5.1 r351_1000 conda-forge
r 3.5.1 r35_1002 conda-forge
r 3.5.1 r35_1003 conda-forge
r 3.6.0 r36_0 pkgs/r
r 3.6 r36_1002 conda-forge
r 3.6 r36_1003 conda-forge
r 3.6 r36_1004 conda-forge
r 3.6.0 r43_0 pkgs/r
r 4.0 r40_1004 conda-forge
r 4.0 r40hd8ed1ab_1004 conda-forge
r 4.1 r41hd8ed1ab_1004 conda-forge
r 4.1 r41hd8ed1ab_1005 conda-forge
r 4.1 r41hd8ed1ab_1006 conda-forge
r 4.2 r42hd8ed1ab_1006 conda-forge
r 4.2 r42hd8ed1ab_1007 conda-forge
r 4.3 r43hd8ed1ab_1007 conda-forge
r 4.3 r43hd8ed1ab_1008 conda-forge
r 4.3.1 r43_0 pkgs/r
r 4.4 r44hd8ed1ab_1008 conda-forge
alexlai@ApiServer:~$ ~/anaconda3/bin/conda create -n PY-3.10.15-R-4.4 python=3.10.15 r=4.4 -c conda-forge
Channels:
- conda-forge
- defaults
Platform: linux-64
Collecting package metadata (repodata.json): done
Solving environment: done
## Package Plan ##
environment location: /home/alexlai/anaconda3/envs/PY-3.10.15-R-4.4
added / updated specs:
- python=3.10.15
- r=4.4
The following packages will be downloaded:
package | build
---------------------------|-----------------
_libgcc_mutex-0.1 | conda_forge 3 KB conda-forge
_openmp_mutex-4.5 | 2_gnu 23 KB conda-forge
_r-mutex-1.0.1 | anacondar_1 3 KB conda-forge
binutils_impl_linux-64-2.43| h4bf12b8_2 5.4 MB conda-forge
bwidget-1.10.1 | ha770c72_0 126 KB conda-forge
bzip2-1.0.8 | h4bc722e_7 247 KB conda-forge
c-ares-1.34.3 | hb9d3cd8_1 200 KB conda-forge
ca-certificates-2024.8.30 | hbcca054_0 155 KB conda-forge
cairo-1.18.2 | h3394656_1 956 KB conda-forge
curl-8.11.1 | h332b0f4_0 171 KB conda-forge
font-ttf-dejavu-sans-mono-2.37| hab24e00_0 388 KB conda-forge
font-ttf-inconsolata-3.000 | h77eed37_0 94 KB conda-forge
font-ttf-source-code-pro-2.038| h77eed37_0 684 KB conda-forge
font-ttf-ubuntu-0.83 | h77eed37_3 1.5 MB conda-forge
fontconfig-2.15.0 | h7e30c49_1 259 KB conda-forge
fonts-conda-ecosystem-1 | 0 4 KB conda-forge
fonts-conda-forge-1 | 0 4 KB conda-forge
freetype-2.12.1 | h267a509_2 620 KB conda-forge
fribidi-1.0.10 | h36c2ea0_0 112 KB conda-forge
gcc_impl_linux-64-14.2.0 | h6b349bd_1 69.1 MB conda-forge
gfortran_impl_linux-64-14.2.0| hc73f493_1 16.4 MB conda-forge
graphite2-1.3.13 | h59595ed_1003 95 KB conda-forge
gsl-2.7 | he838d99_0 3.2 MB conda-forge
gxx_impl_linux-64-14.2.0 | h2c03514_1 13.7 MB conda-forge
harfbuzz-9.0.0 | hda332d3_1 1.5 MB conda-forge
icu-75.1 | he02047a_0 11.6 MB conda-forge
kernel-headers_linux-64-3.10.0| he073ed8_18 921 KB conda-forge
keyutils-1.6.1 | h166bdaf_0 115 KB conda-forge
krb5-1.21.3 | h659f571_0 1.3 MB conda-forge
ld_impl_linux-64-2.43 | h712a8e2_2 654 KB conda-forge
lerc-4.0.0 | h27087fc_0 275 KB conda-forge
libblas-3.9.0 |25_linux64_openblas 15 KB conda-forge
libcblas-3.9.0 |25_linux64_openblas 15 KB conda-forge
libcurl-8.11.1 | h332b0f4_0 413 KB conda-forge
libdeflate-1.22 | hb9d3cd8_0 71 KB conda-forge
libedit-3.1.20191231 | he28a2e2_2 121 KB conda-forge
libev-4.33 | hd590300_2 110 KB conda-forge
libexpat-2.6.4 | h5888daf_0 72 KB conda-forge
libffi-3.4.2 | h7f98852_5 57 KB conda-forge
libgcc-14.2.0 | h77fa898_1 829 KB conda-forge
libgcc-devel_linux-64-14.2.0| h41c2201_101 2.6 MB conda-forge
libgcc-ng-14.2.0 | h69a702a_1 53 KB conda-forge
libgfortran-14.2.0 | h69a702a_1 53 KB conda-forge
libgfortran-ng-14.2.0 | h69a702a_1 53 KB conda-forge
libgfortran5-14.2.0 | hd5240d6_1 1.4 MB conda-forge
libglib-2.82.2 | h2ff4ddf_0 3.7 MB conda-forge
libgomp-14.2.0 | h77fa898_1 450 KB conda-forge
libiconv-1.17 | hd590300_2 689 KB conda-forge
libjpeg-turbo-3.0.0 | hd590300_1 604 KB conda-forge
liblapack-3.9.0 |25_linux64_openblas 15 KB conda-forge
liblzma-5.6.3 | hb9d3cd8_1 109 KB conda-forge
liblzma-devel-5.6.3 | hb9d3cd8_1 368 KB conda-forge
libnghttp2-1.64.0 | h161d5f1_0 632 KB conda-forge
libnsl-2.0.1 | hd590300_0 33 KB conda-forge
libopenblas-0.3.28 |pthreads_h94d23a6_1 5.3 MB conda-forge
libpng-1.6.44 | hadc24fc_0 284 KB conda-forge
libsanitizer-14.2.0 | h2a3dede_1 4.3 MB conda-forge
libsqlite-3.47.2 | hee588c1_0 853 KB conda-forge
libssh2-1.11.1 | hf672d98_0 297 KB conda-forge
libstdcxx-14.2.0 | hc0a3c3a_1 3.7 MB conda-forge
libstdcxx-devel_linux-64-14.2.0| h41c2201_101 12.9 MB conda-forge
libstdcxx-ng-14.2.0 | h4852527_1 53 KB conda-forge
libtiff-4.7.0 | hc4654cb_2 419 KB conda-forge
libuuid-2.38.1 | h0b41bf4_0 33 KB conda-forge
libwebp-base-1.4.0 | hd590300_0 429 KB conda-forge
libxcb-1.17.0 | h8a09558_0 387 KB conda-forge
libxcrypt-4.4.36 | hd590300_1 98 KB conda-forge
libzlib-1.3.1 | hb9d3cd8_2 60 KB conda-forge
make-4.4.1 | hb9d3cd8_2 501 KB conda-forge
ncurses-6.5 | he02047a_1 868 KB conda-forge
openssl-3.4.0 | hb9d3cd8_0 2.8 MB conda-forge
pango-1.54.0 | h3a902e7_3 437 KB conda-forge
pcre2-10.44 | hba22ea6_2 930 KB conda-forge
pip-24.3.1 | pyh8b19718_0 1.2 MB conda-forge
pixman-0.44.2 | h29eaf8c_0 372 KB conda-forge
pthread-stubs-0.4 | hb9d3cd8_1002 8 KB conda-forge
python-3.10.15 |h4a871b0_2_cpython 24.1 MB conda-forge
r-4.4 | r44hd8ed1ab_1008 18 KB conda-forge
r-base-4.4.2 | h64c9cd0_0 25.8 MB conda-forge
r-boot-1.3_31 | r44hc72bb7e_0 630 KB conda-forge
r-class-7.3_22 | r44hb1dbf0f_2 107 KB conda-forge
r-cluster-2.1.7 | r44hb67ce94_0 576 KB conda-forge
r-codetools-0.2_20 | r44hc72bb7e_1 106 KB conda-forge
r-foreign-0.8_87 | r44hb1dbf0f_1 263 KB conda-forge
r-kernsmooth-2.23_24 | r44hc2011d3_1 100 KB conda-forge
r-lattice-0.22_6 | r44hb1dbf0f_1 1.3 MB conda-forge
r-mass-7.3_60.0.1 | r44hb1dbf0f_1 1.1 MB conda-forge
r-matrix-1.6_5 | r44he966344_1 3.8 MB conda-forge
r-mgcv-1.9_1 | r44h0d28552_1 3.1 MB conda-forge
r-nlme-3.1_165 | r44hbcb9c34_1 2.2 MB conda-forge
r-nnet-7.3_19 | r44hb1dbf0f_2 128 KB conda-forge
r-recommended-4.4 | r44hd8ed1ab_1007 18 KB conda-forge
r-rpart-4.1.23 | r44hb1dbf0f_1 688 KB conda-forge
r-spatial-7.3_17 | r44hb1dbf0f_1 152 KB conda-forge
r-survival-3.7_0 | r44hdb488b9_1 6.0 MB conda-forge
readline-8.2 | h8228510_1 275 KB conda-forge
sed-4.8 | he412f7d_0 264 KB conda-forge
setuptools-75.6.0 | pyhff2d567_1 756 KB conda-forge
sysroot_linux-64-2.17 | h4a8ded7_18 14.8 MB conda-forge
tk-8.6.13 |noxft_h4845f30_101 3.2 MB conda-forge
tktable-2.10 | h8bc8fbc_6 89 KB conda-forge
tzdata-2024b | hc8b5060_0 119 KB conda-forge
wheel-0.45.1 | pyhd8ed1ab_1 61 KB conda-forge
xorg-libice-1.1.1 | hb9d3cd8_1 57 KB conda-forge
xorg-libsm-1.2.4 | he73a12e_1 27 KB conda-forge
xorg-libx11-1.8.10 | h4f16b4b_1 818 KB conda-forge
xorg-libxau-1.0.11 | hb9d3cd8_1 14 KB conda-forge
xorg-libxdmcp-1.1.5 | hb9d3cd8_0 19 KB conda-forge
xorg-libxext-1.3.6 | hb9d3cd8_0 49 KB conda-forge
xorg-libxrender-0.9.11 | hb9d3cd8_2 37 KB conda-forge
xorg-libxt-1.3.1 | hb9d3cd8_0 371 KB conda-forge
xz-5.6.3 | hbcc6ac9_1 23 KB conda-forge
xz-gpl-tools-5.6.3 | hbcc6ac9_1 33 KB conda-forge
xz-tools-5.6.3 | hb9d3cd8_1 88 KB conda-forge
zstd-1.5.6 | ha6fb4c9_0 542 KB conda-forge
------------------------------------------------------------
Total: 270.1 MB
The following NEW packages will be INSTALLED:
_libgcc_mutex conda-forge/linux-64::_libgcc_mutex-0.1-conda_forge
_openmp_mutex conda-forge/linux-64::_openmp_mutex-4.5-2_gnu
_r-mutex conda-forge/noarch::_r-mutex-1.0.1-anacondar_1
binutils_impl_lin~ conda-forge/linux-64::binutils_impl_linux-64-2.43-h4bf12b8_2
bwidget conda-forge/linux-64::bwidget-1.10.1-ha770c72_0
bzip2 conda-forge/linux-64::bzip2-1.0.8-h4bc722e_7
c-ares conda-forge/linux-64::c-ares-1.34.3-hb9d3cd8_1
ca-certificates conda-forge/linux-64::ca-certificates-2024.8.30-hbcca054_0
cairo conda-forge/linux-64::cairo-1.18.2-h3394656_1
curl conda-forge/linux-64::curl-8.11.1-h332b0f4_0
font-ttf-dejavu-s~ conda-forge/noarch::font-ttf-dejavu-sans-mono-2.37-hab24e00_0
font-ttf-inconsol~ conda-forge/noarch::font-ttf-inconsolata-3.000-h77eed37_0
font-ttf-source-c~ conda-forge/noarch::font-ttf-source-code-pro-2.038-h77eed37_0
font-ttf-ubuntu conda-forge/noarch::font-ttf-ubuntu-0.83-h77eed37_3
fontconfig conda-forge/linux-64::fontconfig-2.15.0-h7e30c49_1
fonts-conda-ecosy~ conda-forge/noarch::fonts-conda-ecosystem-1-0
fonts-conda-forge conda-forge/noarch::fonts-conda-forge-1-0
freetype conda-forge/linux-64::freetype-2.12.1-h267a509_2
fribidi conda-forge/linux-64::fribidi-1.0.10-h36c2ea0_0
gcc_impl_linux-64 conda-forge/linux-64::gcc_impl_linux-64-14.2.0-h6b349bd_1
gfortran_impl_lin~ conda-forge/linux-64::gfortran_impl_linux-64-14.2.0-hc73f493_1
graphite2 conda-forge/linux-64::graphite2-1.3.13-h59595ed_1003
gsl conda-forge/linux-64::gsl-2.7-he838d99_0
gxx_impl_linux-64 conda-forge/linux-64::gxx_impl_linux-64-14.2.0-h2c03514_1
harfbuzz conda-forge/linux-64::harfbuzz-9.0.0-hda332d3_1
icu conda-forge/linux-64::icu-75.1-he02047a_0
kernel-headers_li~ conda-forge/noarch::kernel-headers_linux-64-3.10.0-he073ed8_18
keyutils conda-forge/linux-64::keyutils-1.6.1-h166bdaf_0
krb5 conda-forge/linux-64::krb5-1.21.3-h659f571_0
ld_impl_linux-64 conda-forge/linux-64::ld_impl_linux-64-2.43-h712a8e2_2
lerc conda-forge/linux-64::lerc-4.0.0-h27087fc_0
libblas conda-forge/linux-64::libblas-3.9.0-25_linux64_openblas
libcblas conda-forge/linux-64::libcblas-3.9.0-25_linux64_openblas
libcurl conda-forge/linux-64::libcurl-8.11.1-h332b0f4_0
libdeflate conda-forge/linux-64::libdeflate-1.22-hb9d3cd8_0
libedit conda-forge/linux-64::libedit-3.1.20191231-he28a2e2_2
libev conda-forge/linux-64::libev-4.33-hd590300_2
libexpat conda-forge/linux-64::libexpat-2.6.4-h5888daf_0
libffi conda-forge/linux-64::libffi-3.4.2-h7f98852_5
libgcc conda-forge/linux-64::libgcc-14.2.0-h77fa898_1
libgcc-devel_linu~ conda-forge/noarch::libgcc-devel_linux-64-14.2.0-h41c2201_101
libgcc-ng conda-forge/linux-64::libgcc-ng-14.2.0-h69a702a_1
libgfortran conda-forge/linux-64::libgfortran-14.2.0-h69a702a_1
libgfortran-ng conda-forge/linux-64::libgfortran-ng-14.2.0-h69a702a_1
libgfortran5 conda-forge/linux-64::libgfortran5-14.2.0-hd5240d6_1
libglib conda-forge/linux-64::libglib-2.82.2-h2ff4ddf_0
libgomp conda-forge/linux-64::libgomp-14.2.0-h77fa898_1
libiconv conda-forge/linux-64::libiconv-1.17-hd590300_2
libjpeg-turbo conda-forge/linux-64::libjpeg-turbo-3.0.0-hd590300_1
liblapack conda-forge/linux-64::liblapack-3.9.0-25_linux64_openblas
liblzma conda-forge/linux-64::liblzma-5.6.3-hb9d3cd8_1
liblzma-devel conda-forge/linux-64::liblzma-devel-5.6.3-hb9d3cd8_1
libnghttp2 conda-forge/linux-64::libnghttp2-1.64.0-h161d5f1_0
libnsl conda-forge/linux-64::libnsl-2.0.1-hd590300_0
libopenblas conda-forge/linux-64::libopenblas-0.3.28-pthreads_h94d23a6_1
libpng conda-forge/linux-64::libpng-1.6.44-hadc24fc_0
libsanitizer conda-forge/linux-64::libsanitizer-14.2.0-h2a3dede_1
libsqlite conda-forge/linux-64::libsqlite-3.47.2-hee588c1_0
libssh2 conda-forge/linux-64::libssh2-1.11.1-hf672d98_0
libstdcxx conda-forge/linux-64::libstdcxx-14.2.0-hc0a3c3a_1
libstdcxx-devel_l~ conda-forge/noarch::libstdcxx-devel_linux-64-14.2.0-h41c2201_101
libstdcxx-ng conda-forge/linux-64::libstdcxx-ng-14.2.0-h4852527_1
libtiff conda-forge/linux-64::libtiff-4.7.0-hc4654cb_2
libuuid conda-forge/linux-64::libuuid-2.38.1-h0b41bf4_0
libwebp-base conda-forge/linux-64::libwebp-base-1.4.0-hd590300_0
libxcb conda-forge/linux-64::libxcb-1.17.0-h8a09558_0
libxcrypt conda-forge/linux-64::libxcrypt-4.4.36-hd590300_1
libzlib conda-forge/linux-64::libzlib-1.3.1-hb9d3cd8_2
make conda-forge/linux-64::make-4.4.1-hb9d3cd8_2
ncurses conda-forge/linux-64::ncurses-6.5-he02047a_1
openssl conda-forge/linux-64::openssl-3.4.0-hb9d3cd8_0
pango conda-forge/linux-64::pango-1.54.0-h3a902e7_3
pcre2 conda-forge/linux-64::pcre2-10.44-hba22ea6_2
pip conda-forge/noarch::pip-24.3.1-pyh8b19718_0
pixman conda-forge/linux-64::pixman-0.44.2-h29eaf8c_0
pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-hb9d3cd8_1002
python conda-forge/linux-64::python-3.10.15-h4a871b0_2_cpython
r conda-forge/noarch::r-4.4-r44hd8ed1ab_1008
r-base conda-forge/linux-64::r-base-4.4.2-h64c9cd0_0
r-boot conda-forge/noarch::r-boot-1.3_31-r44hc72bb7e_0
r-class conda-forge/linux-64::r-class-7.3_22-r44hb1dbf0f_2
r-cluster conda-forge/linux-64::r-cluster-2.1.7-r44hb67ce94_0
r-codetools conda-forge/noarch::r-codetools-0.2_20-r44hc72bb7e_1
r-foreign conda-forge/linux-64::r-foreign-0.8_87-r44hb1dbf0f_1
r-kernsmooth conda-forge/linux-64::r-kernsmooth-2.23_24-r44hc2011d3_1
r-lattice conda-forge/linux-64::r-lattice-0.22_6-r44hb1dbf0f_1
r-mass conda-forge/linux-64::r-mass-7.3_60.0.1-r44hb1dbf0f_1
r-matrix conda-forge/linux-64::r-matrix-1.6_5-r44he966344_1
r-mgcv conda-forge/linux-64::r-mgcv-1.9_1-r44h0d28552_1
r-nlme conda-forge/linux-64::r-nlme-3.1_165-r44hbcb9c34_1
r-nnet conda-forge/linux-64::r-nnet-7.3_19-r44hb1dbf0f_2
r-recommended conda-forge/noarch::r-recommended-4.4-r44hd8ed1ab_1007
r-rpart conda-forge/linux-64::r-rpart-4.1.23-r44hb1dbf0f_1
r-spatial conda-forge/linux-64::r-spatial-7.3_17-r44hb1dbf0f_1
r-survival conda-forge/linux-64::r-survival-3.7_0-r44hdb488b9_1
readline conda-forge/linux-64::readline-8.2-h8228510_1
sed conda-forge/linux-64::sed-4.8-he412f7d_0
setuptools conda-forge/noarch::setuptools-75.6.0-pyhff2d567_1
sysroot_linux-64 conda-forge/noarch::sysroot_linux-64-2.17-h4a8ded7_18
tk conda-forge/linux-64::tk-8.6.13-noxft_h4845f30_101
tktable conda-forge/linux-64::tktable-2.10-h8bc8fbc_6
tzdata conda-forge/noarch::tzdata-2024b-hc8b5060_0
wheel conda-forge/noarch::wheel-0.45.1-pyhd8ed1ab_1
xorg-libice conda-forge/linux-64::xorg-libice-1.1.1-hb9d3cd8_1
xorg-libsm conda-forge/linux-64::xorg-libsm-1.2.4-he73a12e_1
xorg-libx11 conda-forge/linux-64::xorg-libx11-1.8.10-h4f16b4b_1
xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.11-hb9d3cd8_1
xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.5-hb9d3cd8_0
xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.6-hb9d3cd8_0
xorg-libxrender conda-forge/linux-64::xorg-libxrender-0.9.11-hb9d3cd8_2
xorg-libxt conda-forge/linux-64::xorg-libxt-1.3.1-hb9d3cd8_0
xz conda-forge/linux-64::xz-5.6.3-hbcc6ac9_1
xz-gpl-tools conda-forge/linux-64::xz-gpl-tools-5.6.3-hbcc6ac9_1
xz-tools conda-forge/linux-64::xz-tools-5.6.3-hb9d3cd8_1
zstd conda-forge/linux-64::zstd-1.5.6-ha6fb4c9_0
Proceed ([y]/n)?
...
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
#
# To activate this environment, use
#
# $ conda activate PY-3.10.15-R-4.4
#
# To deactivate an active environment, use
#
# $ conda deactivate ```
> packages are stored in
alexlai@ApiServer:~$ ls /anaconda3/envs/ $ ls
PY-3.10.15-R-4.4
alexlai@ApiServer:/anaconda3/envs/PY-3.10.15-R-4.4/
bin compiler_compat conda-meta etc fonts include lib libexec man sbin share ssl var x86_64-conda_cos6-linux-gnu x86_64-conda-linux-gnu $
alexlai@ApiServer:
>Activate
alexlai@ApiServer:$ echo $PATH $ conda activate PY-3.10.15-R-4.4
/home/alexlai/anaconda3/bin/:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
alexlai@ApiServer:
CondaError: Run 'conda init' before 'conda activate'
alexlai@ApiServer:~$ diff ~/.bashrc.backup ~/.bashrc
alexlai@ApiServer:~$ conda init
no change /home/alexlai/anaconda3/condabin/conda
no change /home/alexlai/anaconda3/bin/conda
no change /home/alexlai/anaconda3/bin/conda-env
no change /home/alexlai/anaconda3/bin/activate
no change /home/alexlai/anaconda3/bin/deactivate
no change /home/alexlai/anaconda3/etc/profile.d/conda.sh
no change /home/alexlai/anaconda3/etc/fish/conf.d/conda.fish
no change /home/alexlai/anaconda3/shell/condabin/Conda.psm1
no change /home/alexlai/anaconda3/shell/condabin/conda-hook.ps1
no change /home/alexlai/anaconda3/lib/python3.12/site-packages/xontrib/conda.xsh
no change /home/alexlai/anaconda3/etc/profile.d/conda.csh
modified /home/alexlai/.bashrc
==> For changes to take effect, close and re-open your current shell. <==
alexlai@ApiServer:~$ diff ~/.bashrc.backup ~/.bashrc 117a118,133
>>> conda initialize >>>
!! Contents within this block are managed by 'conda init' !!
__conda_setup="$('/home/alexlai/anaconda3/bin/conda' 'shell.bash' 'hook' 2> /dev/null)" if [ $? -eq 0 ]; then eval "$__conda_setup" else if [ -f "/home/alexlai/anaconda3/etc/profile.d/conda.sh" ]; then . "/home/alexlai/anaconda3/etc/profile.d/conda.sh" else export PATH="/home/alexlai/anaconda3/bin:$PATH" fi fi unset __conda_setup
<<< conda initialize <<<
> relogin
(base) alexlai@ApiServer:~$ echo $PATH /home/alexlai/anaconda3/bin:/home/alexlai/anaconda3/condabin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
(base) alexlai@ApiServer:$ ls /home/alexlai/anaconda3/etc/profile.d/conda.sh
/home/alexlai/anaconda3/etc/profile.d/conda.sh
(base) alexlai@ApiServer:$ less /home/alexlai/anaconda3/etc/profile.d/conda.sh
(base) alexlai@ApiServer:~$ conda activate PY-3.10.15-R-4.4
(PY-3.10.15-R-4.4) alexlai@ApiServer:$ which python
/home/alexlai/anaconda3/envs/PY-3.10.15-R-4.4/bin/python
(PY-3.10.15-R-4.4) alexlai@ApiServer:$ which pip
/home/alexlai/anaconda3/envs/PY-3.10.15-R-4.4/bin/pip
(PY-3.10.15-R-4.4) alexlai@ApiServer:$ which pip3
/home/alexlai/anaconda3/envs/PY-3.10.15-R-4.4/bin/pip3
(PY-3.10.15-R-4.4) alexlai@ApiServer:$ which R
/home/alexlai/anaconda3/envs/PY-3.10.15-R-4.4/bin/R